Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent genome-scale CRISPR-Cas9 knockout screens (or GeCKO) technology.

MAGeCK-VISPR is a comprehensive quality control, analysis and visualization workflow for CRISPR/Cas9 screens. The workflow combines: with VISPR to interactively explore results and quality control in a web-based frontend. Integrative analysis pipeline for pooled CRISPR functional genetic screens.

2014年12月5日 · We propose the Model-based Analysis of Genome-wide CRISPR/Cas9 Knockout (MAGeCK) method for prioritizing single-guide RNAs, genes and pathways in genome-scale CRISPR/Cas9 knockout screens.

MAGeCK (Model-based Analysis of Genome-wide CRISPR/Cas9 Knockout) is a method for prioritizing single-guide RNAs, genes and pathways in genome-scale CRISPR/Cas9 knockout screens.

2019年2月1日 · Here, we describe how to perform computational analysis of CRISPR screens using the MAGeCKFlute pipeline. MAGeCKFlute combines the MAGeCK and MAGeCK-VISPR algorithms and incorporates...

It's used by MAGeCK for quality controls and pathway enrichment tests. Compared with the official GSEA program, the main advantage is its easy use and extremely fast running speed.

MAGeCK2 is a new computational tool, built upon MAGeCK, for CRISPR screening analysis. Compared with MAGeCK, MAGeCK2 highlights the following additional functionalities: More functions to be added. For instructions on installation, …

MAGeCK-iNC (MAGeCK-including Negative Controls) is a bioinformatics pipeline for the analysis of pooled genetic screens created by Ruilin Tian, Kampmann Lab (2019).

We propose the Model-based Analysis of Genome-wide CRISPR/Cas9 Knockout (MAGeCK) method for prioritizing single-guide RNAs, genes and pathways in genome-scale CRISPR/Cas9 knockout screens.

Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent genome-scale CRISPR-Cas9 knockout screens (or GeCKO) technology.